Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU64474.1 | ccsA | DEAC_c36760 | DEAC_c15240 | Tetratricopeptide repeat protein. | Cytochrome c biogenesis protein CcsA. | 0.570 |
KLU64474.1 | ccsB | DEAC_c36760 | DEAC_c15230 | Tetratricopeptide repeat protein. | Cytochrome c biogenesis protein CcsB. | 0.575 |
KLU67093.1 | ccsA | DEAC_c10270 | DEAC_c15240 | Tetratricopeptide repeat protein. | Cytochrome c biogenesis protein CcsA. | 0.502 |
KLU67093.1 | ccsB | DEAC_c10270 | DEAC_c15230 | Tetratricopeptide repeat protein. | Cytochrome c biogenesis protein CcsB. | 0.510 |
atpA | atpB | DEAC_c09890 | DEAC_c09930 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.999 |
atpA | ccsB | DEAC_c09890 | DEAC_c15230 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Cytochrome c biogenesis protein CcsB. | 0.525 |
atpA | qcrB | DEAC_c09890 | DEAC_c15790 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Menaquinol-cytochrome c reductase cytochrome b subunit. | 0.509 |
atpB | atpA | DEAC_c09930 | DEAC_c09890 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
atpB | ccsA | DEAC_c09930 | DEAC_c15240 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome c biogenesis protein CcsA. | 0.485 |
atpB | ccsB | DEAC_c09930 | DEAC_c15230 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome c biogenesis protein CcsB. | 0.548 |
atpB | qcrB | DEAC_c09930 | DEAC_c15790 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Menaquinol-cytochrome c reductase cytochrome b subunit. | 0.935 |
ccsA | KLU64474.1 | DEAC_c15240 | DEAC_c36760 | Cytochrome c biogenesis protein CcsA. | Tetratricopeptide repeat protein. | 0.570 |
ccsA | KLU67093.1 | DEAC_c15240 | DEAC_c10270 | Cytochrome c biogenesis protein CcsA. | Tetratricopeptide repeat protein. | 0.502 |
ccsA | atpB | DEAC_c15240 | DEAC_c09930 | Cytochrome c biogenesis protein CcsA. | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.485 |
ccsA | ccsB | DEAC_c15240 | DEAC_c15230 | Cytochrome c biogenesis protein CcsA. | Cytochrome c biogenesis protein CcsB. | 0.991 |
ccsA | dsbD | DEAC_c15240 | DEAC_c19550 | Cytochrome c biogenesis protein CcsA. | Thiol:disulfide interchange protein DsbD precursor. | 0.740 |
ccsA | hemA | DEAC_c15240 | DEAC_c15260 | Cytochrome c biogenesis protein CcsA. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.803 |
ccsA | hemC | DEAC_c15240 | DEAC_c15270 | Cytochrome c biogenesis protein CcsA. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.705 |
ccsA | nasF | DEAC_c15240 | DEAC_c15280 | Cytochrome c biogenesis protein CcsA. | uroporphyrinogen-III C-methyltransferase. | 0.968 |
ccsA | qcrB | DEAC_c15240 | DEAC_c15790 | Cytochrome c biogenesis protein CcsA. | Menaquinol-cytochrome c reductase cytochrome b subunit. | 0.654 |
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