STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU66868.1Coat F domain protein. (88 aa)    
Predicted Functional Partners:
KLU66869.1
Hypothetical protein.
  
  
 0.692
gerBC
Spore germination protein B3 precursor.
  
     0.596
yndE_2
Spore germination protein YndE.
  
   
 0.572
gerBA_1
Spore germination protein B1.
  
   
 0.564
gerBA_2
Spore germination protein B1.
  
   
 0.520
ytpB
Tetraprenyl-beta-curcumene synthase.
 
     0.495
KLU67146.1
Stage II sporulation protein R (spore_II_R).
  
    0.493
gerAC
Spore germination protein A3 precursor.
  
     0.483
ypeB
Sporulation protein YpeB.
  
    0.451
spoVAD_1
Stage V sporulation protein AD.
  
    0.437
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.