Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLU65873.1Hypothetical protein. (393 aa)    
Predicted Functional Partners:
KLU65874.1
Hypothetical protein.
 
  
 0.811
KLU65067.1
Hypothetical protein.
  
 0.713
KLU65068.1
Hypothetical protein.
 
  
 0.683
arnB_1
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase.
 
    0.473
KLU65871.1
UDP-glucose 4-epimerase.
  
    0.470
pseB
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
       0.465
KLU65875.1
Hypothetical protein.
       0.457
fliS_1
Flagellar protein FliS.
       0.457
pseG
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase.
 
    0.448
kpsU
3-deoxy-manno-octulosonate cytidylyltransferase.
 
    0.442
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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