Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sunS_1SPBc2 prophage-derived glycosyltransferase SunS. (355 aa)    
Predicted Functional Partners:
csrA
Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
       0.765
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
       0.765
KLU65883.1
Hypothetical protein.
       0.617
flgL
Flagellar hook-associated protein 3.
     
 0.589
malQ
4-alpha-glucanotransferase.
     
 0.538
KLU67606.1
Collagen triple helix repeat (20 copies).
  
     0.532
flgK
Flagellar hook-associated protein 1.
       0.526
KLU65886.1
FlgN protein.
       0.523
hag
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
     
 0.512
KLU65887.1
Anti-sigma28 factor FlgM.
       0.470
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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