STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU66127.1Polysaccharide deacetylase. (235 aa)    
Predicted Functional Partners:
mshA_2
D-inositol-3-phosphate glycosyltransferase.
 
     0.822
mgtA
GDP-mannose-dependent alpha-mannosyltransferase.
 
     0.740
tuaC
Putative teichuronic acid biosynthesis glycosyltransferase TuaC.
       0.678
epsF_2
Putative glycosyltransferase EpsF.
       0.678
KLU66123.1
O-antigen ligase.
       0.669
KLU66129.1
Hypothetical protein.
       0.572
icaA
poly-beta-1,6-N-acetyl-D-glucosamine synthase.
  
 
 0.532
KLU63874.1
Beta-monoglucosyldiacylglycerol synthase.
  
 
 0.532
KLU66130.1
PGL/p-HBAD biosynthesis glycosyltransferase.
 
 
  0.519
KLU64393.1
Hypothetical protein.
  
    0.493
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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