STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcnB_2Hydrogen cyanide synthase subunit HcnB. (95 aa)    
Predicted Functional Partners:
rsxB_7
Electron transport complex subunit RsxB.
  
 0.993
soxB
Sarcosine oxidase subunit beta.
 
  
 0.972
hcnB_1
Hydrogen cyanide synthase subunit HcnB.
 
  
  0.963
hcnA
Hydrogen cyanide synthase subunit HcnA.
 
     0.950
KLU66835.1
Ubiquinone biosynthesis protein COQ7.
  
 
 0.907
mlr
4-methylaminobutanoate oxidase (formaldehyde-forming).
 
  
 0.869
gltB_2
Ferredoxin-dependent glutamate synthase 1.
    
 0.802
lhgO
L-2-hydroxyglutarate oxidase LhgO.
  
  
  0.512
rocA
1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.487
narT
Putative nitrate transporter NarT.
  
 
 0.485
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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