Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU65224.1 | KLU65486.1 | DEAC_c27760 | DEAC_c26230 | Putative reductase; Belongs to the ArsC family. | DSBA-like thioredoxin domain protein. | 0.910 |
KLU65224.1 | KLU65588.1 | DEAC_c27760 | DEAC_c22180 | Putative reductase; Belongs to the ArsC family. | Hypothetical protein. | 0.851 |
KLU65224.1 | KLU67614.1 | DEAC_c27760 | DEAC_c00080 | Putative reductase; Belongs to the ArsC family. | Hypothetical protein. | 0.858 |
KLU65224.1 | rpoA_1 | DEAC_c27760 | DEAC_c07340 | Putative reductase; Belongs to the ArsC family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.858 |
KLU65224.1 | rpoA_2 | DEAC_c27760 | DEAC_c36940 | Putative reductase; Belongs to the ArsC family. | DNA-directed RNA polymerase subunit alpha. | 0.932 |
KLU65224.1 | rpoB | DEAC_c27760 | DEAC_c06990 | Putative reductase; Belongs to the ArsC family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.850 |
KLU65224.1 | rpoC | DEAC_c27760 | DEAC_c07000 | Putative reductase; Belongs to the ArsC family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.885 |
KLU65224.1 | rpoE_1 | DEAC_c27760 | DEAC_c10160 | Putative reductase; Belongs to the ArsC family. | DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.854 |
KLU65224.1 | rpoZ | DEAC_c27760 | DEAC_c32780 | Putative reductase; Belongs to the ArsC family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.860 |
KLU65224.1 | sigA | DEAC_c27760 | DEAC_c19370 | Putative reductase; Belongs to the ArsC family. | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.851 |
KLU65486.1 | KLU65224.1 | DEAC_c26230 | DEAC_c27760 | DSBA-like thioredoxin domain protein. | Putative reductase; Belongs to the ArsC family. | 0.910 |
KLU65588.1 | KLU65224.1 | DEAC_c22180 | DEAC_c27760 | Hypothetical protein. | Putative reductase; Belongs to the ArsC family. | 0.851 |
KLU65588.1 | KLU67614.1 | DEAC_c22180 | DEAC_c00080 | Hypothetical protein. | Hypothetical protein. | 0.860 |
KLU65588.1 | rpoA_1 | DEAC_c22180 | DEAC_c07340 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.860 |
KLU65588.1 | rpoA_2 | DEAC_c22180 | DEAC_c36940 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha. | 0.860 |
KLU65588.1 | rpoB | DEAC_c22180 | DEAC_c06990 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.917 |
KLU65588.1 | rpoC | DEAC_c22180 | DEAC_c07000 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.908 |
KLU65588.1 | rpoE_1 | DEAC_c22180 | DEAC_c10160 | Hypothetical protein. | DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.652 |
KLU65588.1 | rpoZ | DEAC_c22180 | DEAC_c32780 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.901 |
KLU67614.1 | KLU65224.1 | DEAC_c00080 | DEAC_c27760 | Hypothetical protein. | Putative reductase; Belongs to the ArsC family. | 0.858 |
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