STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnmV_2Ribonuclease M5. (114 aa)    
Predicted Functional Partners:
KLU67310.1
Hypothetical protein.
  
     0.756
KLU68012.1
Hypothetical protein.
  
     0.727
mecA
Adapter protein MecA 1.
  
     0.669
KLU67013.1
Maltose ABC transporter periplasmic protein.
  
     0.633
mshB
1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase.
  
     0.614
KLU64609.1
Thioredoxin 2.
  
     0.591
srrA_3
Transcriptional regulatory protein SrrA.
       0.551
phoR_4
Alkaline phosphatase synthesis sensor protein PhoR.
       0.551
KLU65614.1
ABC-2 family transporter protein.
  
     0.523
KLU67161.1
Initiation-control protein YabA.
 
     0.516
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.