STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpiBSensor histidine kinase DpiB. (444 aa)    
Predicted Functional Partners:
dcuR
Transcriptional regulatory protein DcuR.
 
 0.945
ypdB_4
Transcriptional regulatory protein YpdB.
 
  
 0.889
mprA_1
Response regulator MprA.
  
 0.741
KLU65788.1
Hypothetical protein.
  
  
  0.699
yiaO
2,3-diketo-L-gulonate-binding periplasmic protein YiaO precursor.
    
 0.653
citT_2
Transcriptional regulatory protein CitT.
 
 0.612
bvgS
Virulence sensor protein BvgS precursor.
   
 
 0.591
arcB
Aerobic respiration control sensor protein ArcB.
   
 
 0.591
rpfC
Sensory/regulatory protein RpfC.
   
 
 0.591
citT_1
Transcriptional regulatory protein CitT.
 
 0.579
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.