STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU64517.1Putative formate dehydrogenase. (893 aa)    
Predicted Functional Partners:
hndC_2
NADP-reducing hydrogenase subunit HndC.
 
 0.989
hndC_4
NADP-reducing hydrogenase subunit HndC.
 
 0.989
hndC_1
NADP-reducing hydrogenase subunit HndC.
 
 0.987
KLU65924.1
Iron hydrogenase 1.
   
 0.956
hycE
Formate hydrogenlyase subunit 5 precursor.
  
 
 0.954
hycG
Formate hydrogenlyase subunit 7.
 
 0.944
padH
NADH-dependent phenylglyoxylate dehydrogenase subunit epsilon.
 
 
 0.943
hyfA_1
Hydrogenase-4 component A.
  
 0.941
hyfA_2
Hydrogenase-4 component A.
  
 0.918
gltD
Glutamate synthase [NADPH] small chain.
   
 0.915
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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