Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| alaA | argJ | DEAC_c35810 | DEAC_c07440 | Glutamate-pyruvate aminotransferase AlaA. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.676 |
| alaA | gltB_2 | DEAC_c35810 | DEAC_c30620 | Glutamate-pyruvate aminotransferase AlaA. | Ferredoxin-dependent glutamate synthase 1. | 0.864 |
| alaA | ilvE | DEAC_c35810 | DEAC_c15680 | Glutamate-pyruvate aminotransferase AlaA. | Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.670 |
| alaA | ldh | DEAC_c35810 | DEAC_c16360 | Glutamate-pyruvate aminotransferase AlaA. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.683 |
| alaA | nifJ_1 | DEAC_c35810 | DEAC_c06530 | Glutamate-pyruvate aminotransferase AlaA. | Pyruvate-flavodoxin oxidoreductase. | 0.857 |
| alaA | nifJ_2 | DEAC_c35810 | DEAC_c10950 | Glutamate-pyruvate aminotransferase AlaA. | Pyruvate-flavodoxin oxidoreductase. | 0.834 |
| alaA | nifJ_3 | DEAC_c35810 | DEAC_c39740 | Glutamate-pyruvate aminotransferase AlaA. | Pyruvate-flavodoxin oxidoreductase. | 0.857 |
| alaA | pabB | DEAC_c35810 | DEAC_c03310 | Glutamate-pyruvate aminotransferase AlaA. | Aminodeoxychorismate synthase component 1. | 0.692 |
| alaA | pheA_2 | DEAC_c35810 | DEAC_c22120 | Glutamate-pyruvate aminotransferase AlaA. | Prephenate dehydratase. | 0.730 |
| alaA | trpC | DEAC_c35810 | DEAC_c25160 | Glutamate-pyruvate aminotransferase AlaA. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.689 |
| argJ | alaA | DEAC_c07440 | DEAC_c35810 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Glutamate-pyruvate aminotransferase AlaA. | 0.676 |
| argJ | gltB_2 | DEAC_c07440 | DEAC_c30620 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Ferredoxin-dependent glutamate synthase 1. | 0.571 |
| argJ | ldh | DEAC_c07440 | DEAC_c16360 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.582 |
| argJ | nifJ_1 | DEAC_c07440 | DEAC_c06530 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Pyruvate-flavodoxin oxidoreductase. | 0.417 |
| argJ | nifJ_3 | DEAC_c07440 | DEAC_c39740 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Pyruvate-flavodoxin oxidoreductase. | 0.417 |
| argJ | trpC | DEAC_c07440 | DEAC_c25160 | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.506 |
| gltB_2 | alaA | DEAC_c30620 | DEAC_c35810 | Ferredoxin-dependent glutamate synthase 1. | Glutamate-pyruvate aminotransferase AlaA. | 0.864 |
| gltB_2 | argJ | DEAC_c30620 | DEAC_c07440 | Ferredoxin-dependent glutamate synthase 1. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.571 |
| gltB_2 | ilvE | DEAC_c30620 | DEAC_c15680 | Ferredoxin-dependent glutamate synthase 1. | Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.474 |
| gltB_2 | ldh | DEAC_c30620 | DEAC_c16360 | Ferredoxin-dependent glutamate synthase 1. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.997 |
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