STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU64468.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
KLU65180.1
Polysulfide reductase, NrfD.
 
  
 0.808
KLU65177.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
 
    0.799
KLU65175.1
Hypothetical protein.
 
     0.792
KLU65176.1
Nitrate reductase gamma subunit.
 
    0.786
KLU64471.1
Hypothetical protein.
 
    0.786
dsvB
Sulfite reductase, dissimilatory-type subunit beta.
 
    0.759
clrB
Chlorate reductase subunit beta.
 
  
 0.748
dsvA
Sulfite reductase, dissimilatory-type subunit alpha.
 
    0.742
dsvC
Sulfite reductase, dissimilatory-type subunit gamma.
 
     0.660
KLU67807.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
 
    0.601
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.