Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU64474.1 | KLU64745.1 | DEAC_c36760 | DEAC_c33890 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.447 |
KLU64474.1 | KLU66935.1 | DEAC_c36760 | DEAC_c08690 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.552 |
KLU64474.1 | KLU67902.1 | DEAC_c36760 | DEAC_c03090 | Tetratricopeptide repeat protein. | Tetratricopeptide repeat protein. | 0.444 |
KLU64474.1 | ccsA | DEAC_c36760 | DEAC_c15240 | Tetratricopeptide repeat protein. | Cytochrome c biogenesis protein CcsA. | 0.570 |
KLU64474.1 | ccsB | DEAC_c36760 | DEAC_c15230 | Tetratricopeptide repeat protein. | Cytochrome c biogenesis protein CcsB. | 0.575 |
KLU64474.1 | gluP_2 | DEAC_c36760 | DEAC_c02780 | Tetratricopeptide repeat protein. | Rhomboid protease GluP. | 0.490 |
KLU64474.1 | ribBA | DEAC_c36760 | DEAC_c01880 | Tetratricopeptide repeat protein. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.671 |
KLU64474.1 | secD | DEAC_c36760 | DEAC_c18700 | Tetratricopeptide repeat protein. | Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.475 |
KLU64474.1 | secF | DEAC_c36760 | DEAC_c18690 | Tetratricopeptide repeat protein. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.475 |
KLU64474.1 | yccM_3 | DEAC_c36760 | DEAC_c36770 | Tetratricopeptide repeat protein. | Putative electron transport protein YccM. | 0.464 |
KLU64745.1 | KLU64474.1 | DEAC_c33890 | DEAC_c36760 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.447 |
KLU66935.1 | KLU64474.1 | DEAC_c08690 | DEAC_c36760 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.552 |
KLU67902.1 | KLU64474.1 | DEAC_c03090 | DEAC_c36760 | Tetratricopeptide repeat protein. | Tetratricopeptide repeat protein. | 0.444 |
KLU67902.1 | gluP_2 | DEAC_c03090 | DEAC_c02780 | Tetratricopeptide repeat protein. | Rhomboid protease GluP. | 0.745 |
KLU67902.1 | ribBA | DEAC_c03090 | DEAC_c01880 | Tetratricopeptide repeat protein. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.621 |
ccsA | KLU64474.1 | DEAC_c15240 | DEAC_c36760 | Cytochrome c biogenesis protein CcsA. | Tetratricopeptide repeat protein. | 0.570 |
ccsA | ccsB | DEAC_c15240 | DEAC_c15230 | Cytochrome c biogenesis protein CcsA. | Cytochrome c biogenesis protein CcsB. | 0.991 |
ccsB | KLU64474.1 | DEAC_c15230 | DEAC_c36760 | Cytochrome c biogenesis protein CcsB. | Tetratricopeptide repeat protein. | 0.575 |
ccsB | ccsA | DEAC_c15230 | DEAC_c15240 | Cytochrome c biogenesis protein CcsB. | Cytochrome c biogenesis protein CcsA. | 0.991 |
gluP_2 | KLU64474.1 | DEAC_c02780 | DEAC_c36760 | Rhomboid protease GluP. | Tetratricopeptide repeat protein. | 0.490 |
page 1 of 2