STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU64100.1ABC-2 family transporter protein. (250 aa)    
Predicted Functional Partners:
yxlF_3
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.969
KLU64101.1
ABC-2 family transporter protein.
 
   
 0.966
sphS
Sensor protein SphS.
 
     0.926
arlR_2
Response regulator ArlR.
 
     0.871
ytrF_2
ABC transporter permease YtrF precursor.
  
     0.610
kdpD_2
Sensor protein KdpD.
 
     0.567
yxlF_1
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.522
KLU64313.1
ABC-2 family transporter protein.
  
     0.508
KLU64312.1
Hypothetical protein.
  
     0.497
KLU64311.1
ABC-2 family transporter protein.
  
     0.485
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.