STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltaSLipoteichoic acid synthase. (684 aa)    
Predicted Functional Partners:
KLU66305.1
Phage tail sheath protein.
  
     0.623
KLU66316.1
Hypothetical protein.
  
     0.595
KLU66307.1
Phage virion morphogenesis family protein.
  
     0.562
KLU66315.1
Phage Mu protein F like protein.
  
     0.476
degS_2
Signal transduction histidine-protein kinase/phosphatase DegS.
  
     0.464
KLU65138.1
NYN domain protein.
  
 
   0.442
yneA
Cell division suppressor protein YneA.
  
   
 0.441
lytC_24
N-acetylmuramoyl-L-alanine amidase LytC precursor.
  
     0.435
KLU66908.1
Glycogen synthase.
  
  
 0.434
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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