STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sirSulfite reductase [ferredoxin]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (549 aa)    
Predicted Functional Partners:
nasF
uroporphyrinogen-III C-methyltransferase.
 
  
 0.962
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
 
 
 0.922
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
    
 0.904
cdr_1
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
 0.903
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
    
 0.903
cdr_2
Coenzyme A disulfide reductase.
 
 0.903
padH
NADH-dependent phenylglyoxylate dehydrogenase subunit epsilon.
   
 0.878
sat
Sulfate adenylyltransferase; Belongs to the sulfate adenylyltransferase family.
 
  
 0.860
cbiT
Putative cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating].
    
 0.841
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA.
  
  
 0.789
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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