Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU63938.1 | KLU63939.1 | DEAC_c41670 | DEAC_c41680 | Hypothetical protein. | Hypothetical protein. | 0.598 |
KLU63939.1 | KLU63938.1 | DEAC_c41680 | DEAC_c41670 | Hypothetical protein. | Hypothetical protein. | 0.598 |
KLU63939.1 | KLU63940.1 | DEAC_c41680 | DEAC_c41690 | Hypothetical protein. | Hypothetical protein. | 0.483 |
KLU63939.1 | acsA | DEAC_c41680 | DEAC_c06690 | Hypothetical protein. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.477 |
KLU63939.1 | glmM | DEAC_c41680 | DEAC_c41080 | Hypothetical protein. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.474 |
KLU63939.1 | glmS | DEAC_c41680 | DEAC_c41070 | Hypothetical protein. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.563 |
KLU63939.1 | ldh | DEAC_c41680 | DEAC_c16360 | Hypothetical protein. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.467 |
KLU63939.1 | nifJ_1 | DEAC_c41680 | DEAC_c06530 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.722 |
KLU63939.1 | nifJ_3 | DEAC_c41680 | DEAC_c39740 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.722 |
KLU63939.1 | panD | DEAC_c41680 | DEAC_c11550 | Hypothetical protein. | Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.879 |
KLU63939.1 | pgcA | DEAC_c41680 | DEAC_c01990 | Hypothetical protein. | Phosphoglucomutase. | 0.474 |
KLU63940.1 | KLU63939.1 | DEAC_c41690 | DEAC_c41680 | Hypothetical protein. | Hypothetical protein. | 0.483 |
KLU63940.1 | nifJ_1 | DEAC_c41690 | DEAC_c06530 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.749 |
KLU63940.1 | nifJ_3 | DEAC_c41690 | DEAC_c39740 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.749 |
acsA | KLU63939.1 | DEAC_c06690 | DEAC_c41680 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein. | 0.477 |
acsA | ldh | DEAC_c06690 | DEAC_c16360 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.940 |
acsA | nifJ_1 | DEAC_c06690 | DEAC_c06530 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Pyruvate-flavodoxin oxidoreductase. | 0.977 |
acsA | nifJ_3 | DEAC_c06690 | DEAC_c39740 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Pyruvate-flavodoxin oxidoreductase. | 0.977 |
glmM | KLU63939.1 | DEAC_c41080 | DEAC_c41680 | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | Hypothetical protein. | 0.474 |
glmM | glmS | DEAC_c41080 | DEAC_c41070 | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.985 |
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