STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nikO_2Nickel import ATP-binding protein NikO. (263 aa)    
Predicted Functional Partners:
nikQ_2
Nickel transport protein NikQ.
 
 0.994
nikMN_2
Fused nickel transport protein NikMN.
 
 0.984
nikQ_1
Nickel transport protein NikQ.
 
 0.974
nikMN_1
Fused nickel transport protein NikMN.
 
 0.965
bioY
Biotin transporter BioY.
   
 0.952
ecfT_2
Energy-coupling factor transporter transmembrane protein EcfT.
 0.948
ecfT_1
Energy-coupling factor transporter transmembrane protein EcfT.
 
 0.947
ecfT_3
Energy-coupling factor transporter transmembrane protein EcfT.
 
 0.945
cbiQ
Cobalt transport protein CbiQ.
 
 0.944
cbiM
Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.935
Your Current Organism:
Desulfosporosinus acididurans
NCBI taxonomy Id: 476652
Other names: D. acididurans, DSM 27692, Desulfosporosinus acididurans Sanchez-Andrea et al. 2015, Desulfosporosinus sp. D, Desulfosporosinus sp. E, Desulfosporosinus sp. M1, JCM 19471, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.