STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apxIB_1Putative hemolysin secretion transport system ATP-binding protein. (742 aa)    
Predicted Functional Partners:
hlyD
Putative hemolysin secretion transport system membrane protein.
 
 
 0.983
pstB
Phosphate import ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.899
CUO57445.1
Vitamin K epoxide reductase family.
 
     0.820
cotSA
Putative glycosyltransferase.
 
  
 0.746
CUO57625.1
Putative glycosyl transferase.
       0.704
CUO57545.1
Uncharacterised protein.
       0.686
tlpA_2
Alkyl hydroperoxide reductase.
       0.686
resA_1
Thiol:disulfide interchange protein.
       0.615
apxIB_2
ABC transporter related protein.
 
 
 
0.611
CUO83679.1
Putative ABC transport system%2C lipoprotein.
  
 
 0.595
Your Current Organism:
Bacteroides caccae
NCBI taxonomy Id: 47678
Other names: ATCC 43185, B. caccae, CCUG 38735, CIP 104201, DSM 19024, JCM 9498, NCTC 13051, VPI 3452A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.