STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO58164.1Glycosyl transferase family protein. (350 aa)    
Predicted Functional Partners:
CUO58200.1
Rhamnosyltransferase.
       0.773
wzxC_1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.773
metG
Putative methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.773
CUO58033.1
Glycosyltransferase.
       0.613
CUO58080.1
Hemolysin hemolytic protein.
       0.613
CUO58114.1
LPS biosynthesis protein.
       0.613
CUO57964.1
Glycosyltransferase.
       0.593
mshA_1
Glycosyltransferase.
       0.593
CUO58309.1
Peptidase S24-like./Bacteriophage CI repressor helix-turn-helix domain.
       0.501
Your Current Organism:
Bacteroides caccae
NCBI taxonomy Id: 47678
Other names: ATCC 43185, B. caccae, CCUG 38735, CIP 104201, DSM 19024, JCM 9498, NCTC 13051, VPI 3452A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.