Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO66429.1 | infB | ERS852494_00454 | ERS852494_00457 | Putative transmembrane protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.569 |
CUO66429.1 | nusA | ERS852494_00454 | ERS852494_00456 | Putative transmembrane protein. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.690 |
CUO66429.1 | rimP | ERS852494_00454 | ERS852494_00455 | Putative transmembrane protein. | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.690 |
infB | CUO66429.1 | ERS852494_00457 | ERS852494_00454 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Putative transmembrane protein. | 0.569 |
infB | nusA | ERS852494_00457 | ERS852494_00456 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.980 |
infB | rimP | ERS852494_00457 | ERS852494_00455 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.918 |
nusA | CUO66429.1 | ERS852494_00456 | ERS852494_00454 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | Putative transmembrane protein. | 0.690 |
nusA | infB | ERS852494_00456 | ERS852494_00457 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.980 |
nusA | rimP | ERS852494_00456 | ERS852494_00455 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.982 |
rimP | CUO66429.1 | ERS852494_00455 | ERS852494_00454 | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | Putative transmembrane protein. | 0.690 |
rimP | infB | ERS852494_00455 | ERS852494_00457 | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.918 |
rimP | nusA | ERS852494_00455 | ERS852494_00456 | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.982 |