STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gldHPutative gliding motility protein. (159 aa)    
Predicted Functional Partners:
dnaX_1
DNA polymerase III subunit delta.
 
     0.898
tpl
Uncharacterized homolog of PSP1.
 
     0.872
metF
5%2C10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
       0.827
CUQ06124.1
Uncharacterised protein.
  
     0.743
mreD
Rod shape-determining protein MreD.
  
     0.721
CUP49011.1
Gliding motility-associated lipoprotein GldB.
  
   
 0.673
CUP57995.1
Organic solvent tolerance protein OstA.
  
     0.640
CUP84553.1
Activator of Hsp90 ATPase homolog 1-like protein.
  
     0.640
CUP58759.1
Uncharacterized ACR%2C COG1399.
  
     0.612
CUO81580.1
SCO1/SenC.
  
     0.594
Your Current Organism:
Bacteroides caccae
NCBI taxonomy Id: 47678
Other names: ATCC 43185, B. caccae, CCUG 38735, CIP 104201, DSM 19024, JCM 9498, NCTC 13051, VPI 3452A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.