CUO88559.1 protein (Bacteroides caccae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

CUO88559.1

Uncharacterised protein. (193 aa)

Predicted Functional Partners:

CUO88588.1

0.796

CUO88625.1

0.796

CUO88662.1

0.704

CUO88695.1

0.567

CUO88728.1

0.567

CUO88764.1

0.567

CUO88803.1

0.567

CUO88836.1

0.567

CUO88871.1

0.567

CUO88928.1

0.536

Your Current Organism:

Bacteroides caccae

NCBI taxonomy Id: 47678
Other names: ATCC 43185, B. caccae, CCUG 38735, CIP 104201, DSM 19024, JCM 9498, NCTC 13051, VPI 3452A

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUO88559.1	CUO88588.1	ERS852494_00990	ERS852494_00991	Uncharacterised protein.	Phage tail tape measure protein%2C TP901 family%2C core region.	0.796
CUO88559.1	CUO88625.1	ERS852494_00990	ERS852494_00992	Uncharacterised protein.	Uncharacterised protein.	0.796
CUO88559.1	CUO88662.1	ERS852494_00990	ERS852494_00993	Uncharacterised protein.	Uncharacterised protein.	0.704
CUO88559.1	CUO88695.1	ERS852494_00990	ERS852494_00994	Uncharacterised protein.	Uncharacterised protein.	0.567
CUO88559.1	CUO88728.1	ERS852494_00990	ERS852494_00995	Uncharacterised protein.	Uncharacterised protein.	0.567
CUO88559.1	CUO88764.1	ERS852494_00990	ERS852494_00996	Uncharacterised protein.	Uncharacterised protein.	0.567
CUO88559.1	CUO88803.1	ERS852494_00990	ERS852494_00997	Uncharacterised protein.	Uncharacterised protein.	0.567
CUO88559.1	CUO88836.1	ERS852494_00990	ERS852494_00998	Uncharacterised protein.	Uncharacterised protein.	0.567
CUO88559.1	CUO88871.1	ERS852494_00990	ERS852494_00999	Uncharacterised protein.	Predicted phage phi-C31 gp36 major capsid-like protein.	0.567
CUO88559.1	CUO88928.1	ERS852494_00990	ERS852494_01000	Uncharacterised protein.	Caudovirus prohead protease.	0.536
CUO88588.1	CUO88559.1	ERS852494_00991	ERS852494_00990	Phage tail tape measure protein%2C TP901 family%2C core region.	Uncharacterised protein.	0.796
CUO88588.1	CUO88625.1	ERS852494_00991	ERS852494_00992	Phage tail tape measure protein%2C TP901 family%2C core region.	Uncharacterised protein.	0.786
CUO88588.1	CUO88662.1	ERS852494_00991	ERS852494_00993	Phage tail tape measure protein%2C TP901 family%2C core region.	Uncharacterised protein.	0.699
CUO88588.1	CUO88695.1	ERS852494_00991	ERS852494_00994	Phage tail tape measure protein%2C TP901 family%2C core region.	Uncharacterised protein.	0.557
CUO88588.1	CUO88728.1	ERS852494_00991	ERS852494_00995	Phage tail tape measure protein%2C TP901 family%2C core region.	Uncharacterised protein.	0.569
CUO88588.1	CUO88764.1	ERS852494_00991	ERS852494_00996	Phage tail tape measure protein%2C TP901 family%2C core region.	Uncharacterised protein.	0.569
CUO88588.1	CUO88803.1	ERS852494_00991	ERS852494_00997	Phage tail tape measure protein%2C TP901 family%2C core region.	Uncharacterised protein.	0.569
CUO88588.1	CUO88836.1	ERS852494_00991	ERS852494_00998	Phage tail tape measure protein%2C TP901 family%2C core region.	Uncharacterised protein.	0.562
CUO88588.1	CUO88871.1	ERS852494_00991	ERS852494_00999	Phage tail tape measure protein%2C TP901 family%2C core region.	Predicted phage phi-C31 gp36 major capsid-like protein.	0.905
CUO88588.1	CUO88928.1	ERS852494_00991	ERS852494_01000	Phage tail tape measure protein%2C TP901 family%2C core region.	Caudovirus prohead protease.	0.573