Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO64352.1 | CUP43615.1 | ERS852494_00400 | ERS852494_02267 | Superfamily II DNA/RNA helicases%2C SNF2 family. | Bacterial RNA polymerase%2C alpha chain C terminal domain. | 0.940 |
CUO64352.1 | CUQ04391.1 | ERS852494_00400 | ERS852494_03798 | Superfamily II DNA/RNA helicases%2C SNF2 family. | RNA polymerase Rpb6. | 0.980 |
CUO64352.1 | CUQ11381.1 | ERS852494_00400 | ERS852494_03993 | Superfamily II DNA/RNA helicases%2C SNF2 family. | Peptidase S1 and S6 chymotrypsin/Hap. | 0.407 |
CUO64352.1 | bvgS_1 | ERS852494_00400 | ERS852494_00589 | Superfamily II DNA/RNA helicases%2C SNF2 family. | Signal transduction histidine kinase. | 0.462 |
CUO64352.1 | rpoA_2 | ERS852494_00400 | ERS852494_04217 | Superfamily II DNA/RNA helicases%2C SNF2 family. | Putative DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.940 |
CUO64352.1 | rpoB | ERS852494_00400 | ERS852494_04183 | Superfamily II DNA/RNA helicases%2C SNF2 family. | Putative DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.979 |
CUO64352.1 | yhgF | ERS852494_00400 | ERS852494_01070 | Superfamily II DNA/RNA helicases%2C SNF2 family. | RNA-binding protein. | 0.566 |
CUP43615.1 | CUO64352.1 | ERS852494_02267 | ERS852494_00400 | Bacterial RNA polymerase%2C alpha chain C terminal domain. | Superfamily II DNA/RNA helicases%2C SNF2 family. | 0.940 |
CUP43615.1 | CUQ04391.1 | ERS852494_02267 | ERS852494_03798 | Bacterial RNA polymerase%2C alpha chain C terminal domain. | RNA polymerase Rpb6. | 0.982 |
CUP43615.1 | CUQ11381.1 | ERS852494_02267 | ERS852494_03993 | Bacterial RNA polymerase%2C alpha chain C terminal domain. | Peptidase S1 and S6 chymotrypsin/Hap. | 0.511 |
CUP43615.1 | bvgS_1 | ERS852494_02267 | ERS852494_00589 | Bacterial RNA polymerase%2C alpha chain C terminal domain. | Signal transduction histidine kinase. | 0.488 |
CUP43615.1 | rpoB | ERS852494_02267 | ERS852494_04183 | Bacterial RNA polymerase%2C alpha chain C terminal domain. | Putative DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.985 |
CUP43615.1 | yhgF | ERS852494_02267 | ERS852494_01070 | Bacterial RNA polymerase%2C alpha chain C terminal domain. | RNA-binding protein. | 0.833 |
CUQ04391.1 | CUO64352.1 | ERS852494_03798 | ERS852494_00400 | RNA polymerase Rpb6. | Superfamily II DNA/RNA helicases%2C SNF2 family. | 0.980 |
CUQ04391.1 | CUP43615.1 | ERS852494_03798 | ERS852494_02267 | RNA polymerase Rpb6. | Bacterial RNA polymerase%2C alpha chain C terminal domain. | 0.982 |
CUQ04391.1 | CUQ11381.1 | ERS852494_03798 | ERS852494_03993 | RNA polymerase Rpb6. | Peptidase S1 and S6 chymotrypsin/Hap. | 0.511 |
CUQ04391.1 | bvgS_1 | ERS852494_03798 | ERS852494_00589 | RNA polymerase Rpb6. | Signal transduction histidine kinase. | 0.507 |
CUQ04391.1 | rpoA_2 | ERS852494_03798 | ERS852494_04217 | RNA polymerase Rpb6. | Putative DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.984 |
CUQ04391.1 | rpoB | ERS852494_03798 | ERS852494_04183 | RNA polymerase Rpb6. | Putative DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
CUQ04391.1 | yhgF | ERS852494_03798 | ERS852494_01070 | RNA polymerase Rpb6. | RNA-binding protein. | 0.916 |
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