STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsbDThiol:disulfide interchange protein. (684 aa)    
Predicted Functional Partners:
msrAB
Bifunctional methionine sulfoxide reductase A/B; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.989
CUO97684.1
Stress responsive A/B Barrel Domain.
       0.819
CUO57445.1
Vitamin K epoxide reductase family.
  
 
 0.787
udk_1
Uridine kinase.
       0.701
CUP78059.1
Uncharacterised protein.
  
     0.694
mltF
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein.
     
 0.668
CUP24507.1
Redoxin.
 
 
 0.617
CUP18988.1
Outer membrane protein/protective antigen OMA87.
 
     0.614
CUQ16829.1
Thiol:disulfide interchange protein TlpA.
 
 
 0.609
CUQ04391.1
RNA polymerase Rpb6.
  
     0.599
Your Current Organism:
Bacteroides caccae
NCBI taxonomy Id: 47678
Other names: ATCC 43185, B. caccae, CCUG 38735, CIP 104201, DSM 19024, JCM 9498, NCTC 13051, VPI 3452A
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.