STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP02936.1Protein of uncharacterised function (DUF2874). (167 aa)    
Predicted Functional Partners:
CUP02971.1
Protein of uncharacterised function (DUF2874).
 
    0.861
CUP23158.1
Protein of uncharacterised function (DUF2874).
 
    0.767
CUQ13774.1
OmpA family.
  
     0.656
CUP91711.1
Uncharacterised protein.
  
     0.654
CUQ07088.1
Putative lipoprotein.
  
    0.626
CUP35622.1
Phosphate-selective porin O and P.
 
     0.625
CUO67750.1
OmpA family.
  
     0.619
CUQ01929.1
Putative transmembrane protein.
  
     0.614
CUP71477.1
Uncharacterised protein.
  
   
 0.608
CUO74346.1
Family of uncharacterised function (DUF490).
  
     0.606
Your Current Organism:
Bacteroides caccae
NCBI taxonomy Id: 47678
Other names: ATCC 43185, B. caccae, CCUG 38735, CIP 104201, DSM 19024, JCM 9498, NCTC 13051, VPI 3452A
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.