Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO70666.1 | CUO70735.1 | ERS852494_00571 | ERS852494_00573 | Putative transmembrane protein. | SpoIID/LytB domain. | 0.711 |
CUO70666.1 | ampG_1 | ERS852494_00571 | ERS852494_00572 | Putative transmembrane protein. | Major Facilitator Superfamily. | 0.815 |
CUO70666.1 | ampG_2 | ERS852494_00571 | ERS852494_01869 | Putative transmembrane protein. | Major Facilitator Superfamily. | 0.404 |
CUO70666.1 | kfoC_3 | ERS852494_00571 | ERS852494_00574 | Putative transmembrane protein. | Glycosyltransferase. | 0.747 |
CUO70735.1 | CUO70666.1 | ERS852494_00573 | ERS852494_00571 | SpoIID/LytB domain. | Putative transmembrane protein. | 0.711 |
CUO70735.1 | CUO84271.1 | ERS852494_00573 | ERS852494_00877 | SpoIID/LytB domain. | Xylanase. | 0.489 |
CUO70735.1 | ampG_1 | ERS852494_00573 | ERS852494_00572 | SpoIID/LytB domain. | Major Facilitator Superfamily. | 0.919 |
CUO70735.1 | ampG_2 | ERS852494_00573 | ERS852494_01869 | SpoIID/LytB domain. | Major Facilitator Superfamily. | 0.426 |
CUO70735.1 | kfoC_3 | ERS852494_00573 | ERS852494_00574 | SpoIID/LytB domain. | Glycosyltransferase. | 0.995 |
CUO84271.1 | CUO70735.1 | ERS852494_00877 | ERS852494_00573 | Xylanase. | SpoIID/LytB domain. | 0.489 |
CUO84271.1 | ampG_1 | ERS852494_00877 | ERS852494_00572 | Xylanase. | Major Facilitator Superfamily. | 0.739 |
CUO84271.1 | ampG_2 | ERS852494_00877 | ERS852494_01869 | Xylanase. | Major Facilitator Superfamily. | 0.628 |
CUO84271.1 | kfoC_3 | ERS852494_00877 | ERS852494_00574 | Xylanase. | Glycosyltransferase. | 0.552 |
CUP25164.1 | CUP25208.1 | ERS852494_01867 | ERS852494_01868 | alpha-1%2C2-mannosidase%2C putative. | Glycosidase related protein. | 0.915 |
CUP25164.1 | addA | ERS852494_01867 | ERS852494_01870 | alpha-1%2C2-mannosidase%2C putative. | ATP-dependent helicase. | 0.461 |
CUP25164.1 | ampG_2 | ERS852494_01867 | ERS852494_01869 | alpha-1%2C2-mannosidase%2C putative. | Major Facilitator Superfamily. | 0.715 |
CUP25208.1 | CUP25164.1 | ERS852494_01868 | ERS852494_01867 | Glycosidase related protein. | alpha-1%2C2-mannosidase%2C putative. | 0.915 |
CUP25208.1 | addA | ERS852494_01868 | ERS852494_01870 | Glycosidase related protein. | ATP-dependent helicase. | 0.461 |
CUP25208.1 | ampG_2 | ERS852494_01868 | ERS852494_01869 | Glycosidase related protein. | Major Facilitator Superfamily. | 0.769 |
CUP25335.1 | addA | ERS852494_01871 | ERS852494_01870 | RecB family exonuclease. | ATP-dependent helicase. | 0.999 |
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