STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yycG_3Two-component system sensor histidine kinase/response regulator. (1336 aa)    
Predicted Functional Partners:
divJ_2
Two-component system sensor histidine kinase.
 
 
 0.989
luxQ_1
Signal transduction histidine kinase.
 
 
0.955
divK_1
Two-component system sensor histidine kinase.
  
 
 0.953
divK_2
FOG: CheY-like receiver.
  
 
 0.953
evgS_6
Monosaccharide ABC transporter substrate-binding protein%2C CUT2 family (TC 3.A.1.2.-).
 
 
0.950
evgS_8
Uncharacterized protein; His Kinase A (phosphoacceptor) domain./Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase./Response regulator receiver domain./Two component regulator propeller./Bacterial regulatory helix-turn-helix proteins%2C AraC family./Y_Y_Y domain.
 
 
0.898
rpfC_1
Two-component system sensor histidine kinase.
 
 
0.818
arcB_2
Putative two-component sensor histidine kinase with PAS domain.
 
 
0.817
luxQ_2
Two-component system sensor histidine kinase/response regulator.
 
 
0.814
luxQ_5
PAS domain S-box.
 
 
0.814
Your Current Organism:
Bacteroides caccae
NCBI taxonomy Id: 47678
Other names: ATCC 43185, B. caccae, CCUG 38735, CIP 104201, DSM 19024, JCM 9498, NCTC 13051, VPI 3452A
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