Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO50770.1 | CUP36841.1 | ERS852494_00057 | ERS852494_02088 | Putative exported alpha-L-fucosidase protein. | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | 0.513 |
CUP36750.1 | CUP36841.1 | ERS852494_02086 | ERS852494_02088 | Alpha-rhamnosidase. | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | 0.757 |
CUP36750.1 | CUP61231.1 | ERS852494_02086 | ERS852494_02637 | Alpha-rhamnosidase. | Glycosylhydrolase. | 0.562 |
CUP36750.1 | exo-4 | ERS852494_02086 | ERS852494_02087 | Alpha-rhamnosidase. | Putative exported hexosaminidase. | 0.773 |
CUP36841.1 | CUO50770.1 | ERS852494_02088 | ERS852494_00057 | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | Putative exported alpha-L-fucosidase protein. | 0.513 |
CUP36841.1 | CUP36750.1 | ERS852494_02088 | ERS852494_02086 | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | Alpha-rhamnosidase. | 0.757 |
CUP36841.1 | CUP36892.1 | ERS852494_02088 | ERS852494_02089 | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | Uncharacterised protein. | 0.615 |
CUP36841.1 | CUP61231.1 | ERS852494_02088 | ERS852494_02637 | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | Glycosylhydrolase. | 0.531 |
CUP36841.1 | CUP85334.1 | ERS852494_02088 | ERS852494_03233 | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | Alpha-L-fucosidase. | 0.465 |
CUP36841.1 | exo-4 | ERS852494_02088 | ERS852494_02087 | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | Putative exported hexosaminidase. | 0.482 |
CUP36841.1 | lacZ_12 | ERS852494_02088 | ERS852494_02629 | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.460 |
CUP36841.1 | rhaA | ERS852494_02088 | ERS852494_00661 | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.513 |
CUP36841.1 | rhaB_1 | ERS852494_02088 | ERS852494_00660 | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | Rhamnulose kinase/L-fuculose kinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.639 |
CUP36841.1 | rhaB_2 | ERS852494_02088 | ERS852494_01242 | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | L-fuculose kinase. | 0.632 |
CUP36892.1 | CUP36841.1 | ERS852494_02089 | ERS852494_02088 | Uncharacterised protein. | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | 0.615 |
CUP61231.1 | CUP36750.1 | ERS852494_02637 | ERS852494_02086 | Glycosylhydrolase. | Alpha-rhamnosidase. | 0.562 |
CUP61231.1 | CUP36841.1 | ERS852494_02637 | ERS852494_02088 | Glycosylhydrolase. | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | 0.531 |
CUP61231.1 | lacZ_12 | ERS852494_02637 | ERS852494_02629 | Glycosylhydrolase. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.566 |
CUP85334.1 | CUP36841.1 | ERS852494_03233 | ERS852494_02088 | Alpha-L-fucosidase. | Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. | 0.465 |
exo-4 | CUP36750.1 | ERS852494_02087 | ERS852494_02086 | Putative exported hexosaminidase. | Alpha-rhamnosidase. | 0.773 |
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