Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP44327.1 | CUP44367.1 | ERS852494_02286 | ERS852494_02287 | Uncharacterised protein. | Uncharacterised protein. | 0.791 |
CUP44327.1 | CUP44414.1 | ERS852494_02286 | ERS852494_02288 | Uncharacterised protein. | Outer membrane transport energization protein TonB (TC 2.C.1.1.1). | 0.708 |
CUP44327.1 | CUP44469.1 | ERS852494_02286 | ERS852494_02289 | Uncharacterised protein. | Outer membrane transport energization protein TonB (TC 2.C.1.1.1); Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.594 |
CUP44327.1 | CUP44524.1 | ERS852494_02286 | ERS852494_02290 | Uncharacterised protein. | Bacterial SH3 domain. | 0.547 |
CUP44367.1 | CUP44327.1 | ERS852494_02287 | ERS852494_02286 | Uncharacterised protein. | Uncharacterised protein. | 0.791 |
CUP44367.1 | CUP44414.1 | ERS852494_02287 | ERS852494_02288 | Uncharacterised protein. | Outer membrane transport energization protein TonB (TC 2.C.1.1.1). | 0.725 |
CUP44367.1 | CUP44469.1 | ERS852494_02287 | ERS852494_02289 | Uncharacterised protein. | Outer membrane transport energization protein TonB (TC 2.C.1.1.1); Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.610 |
CUP44367.1 | CUP44524.1 | ERS852494_02287 | ERS852494_02290 | Uncharacterised protein. | Bacterial SH3 domain. | 0.559 |
CUP44414.1 | CUP44327.1 | ERS852494_02288 | ERS852494_02286 | Outer membrane transport energization protein TonB (TC 2.C.1.1.1). | Uncharacterised protein. | 0.708 |
CUP44414.1 | CUP44367.1 | ERS852494_02288 | ERS852494_02287 | Outer membrane transport energization protein TonB (TC 2.C.1.1.1). | Uncharacterised protein. | 0.725 |
CUP44414.1 | CUP44469.1 | ERS852494_02288 | ERS852494_02289 | Outer membrane transport energization protein TonB (TC 2.C.1.1.1). | Outer membrane transport energization protein TonB (TC 2.C.1.1.1); Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.712 |
CUP44414.1 | CUP44524.1 | ERS852494_02288 | ERS852494_02290 | Outer membrane transport energization protein TonB (TC 2.C.1.1.1). | Bacterial SH3 domain. | 0.615 |
CUP44469.1 | CUP44327.1 | ERS852494_02289 | ERS852494_02286 | Outer membrane transport energization protein TonB (TC 2.C.1.1.1); Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Uncharacterised protein. | 0.594 |
CUP44469.1 | CUP44367.1 | ERS852494_02289 | ERS852494_02287 | Outer membrane transport energization protein TonB (TC 2.C.1.1.1); Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Uncharacterised protein. | 0.610 |
CUP44469.1 | CUP44414.1 | ERS852494_02289 | ERS852494_02288 | Outer membrane transport energization protein TonB (TC 2.C.1.1.1); Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Outer membrane transport energization protein TonB (TC 2.C.1.1.1). | 0.712 |
CUP44469.1 | CUP44524.1 | ERS852494_02289 | ERS852494_02290 | Outer membrane transport energization protein TonB (TC 2.C.1.1.1); Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Bacterial SH3 domain. | 0.665 |
CUP44524.1 | CUP44327.1 | ERS852494_02290 | ERS852494_02286 | Bacterial SH3 domain. | Uncharacterised protein. | 0.547 |
CUP44524.1 | CUP44367.1 | ERS852494_02290 | ERS852494_02287 | Bacterial SH3 domain. | Uncharacterised protein. | 0.559 |
CUP44524.1 | CUP44414.1 | ERS852494_02290 | ERS852494_02288 | Bacterial SH3 domain. | Outer membrane transport energization protein TonB (TC 2.C.1.1.1). | 0.615 |
CUP44524.1 | CUP44469.1 | ERS852494_02290 | ERS852494_02289 | Bacterial SH3 domain. | Outer membrane transport energization protein TonB (TC 2.C.1.1.1); Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.665 |