Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP50337.1 | CUP58074.1 | ERS852494_02391 | ERS852494_02598 | AsmA family. | Uncharacterised protein. | 0.778 |
CUP50337.1 | envC_2 | ERS852494_02391 | ERS852494_02463 | AsmA family. | Putative transmembrane peptidase. | 0.533 |
CUP52874.1 | alaS_1 | ERS852494_02462 | ERS852494_02464 | Transcriptional regulator. | Putative alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.682 |
CUP52874.1 | envC_2 | ERS852494_02462 | ERS852494_02463 | Transcriptional regulator. | Putative transmembrane peptidase. | 0.834 |
CUP58074.1 | CUP50337.1 | ERS852494_02598 | ERS852494_02391 | Uncharacterised protein. | AsmA family. | 0.778 |
CUP58074.1 | envC_2 | ERS852494_02598 | ERS852494_02463 | Uncharacterised protein. | Putative transmembrane peptidase. | 0.670 |
alaS_1 | CUP52874.1 | ERS852494_02464 | ERS852494_02462 | Putative alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Transcriptional regulator. | 0.682 |
alaS_1 | envC_2 | ERS852494_02464 | ERS852494_02463 | Putative alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Putative transmembrane peptidase. | 0.725 |
envC_1 | envC_2 | ERS852494_00519 | ERS852494_02463 | Membrane-bound metallopeptidase. | Putative transmembrane peptidase. | 0.518 |
envC_1 | mrcA | ERS852494_00519 | ERS852494_01667 | Membrane-bound metallopeptidase. | Membrane carboxypeptidase/penicillin-binding protein. | 0.501 |
envC_2 | CUP50337.1 | ERS852494_02463 | ERS852494_02391 | Putative transmembrane peptidase. | AsmA family. | 0.533 |
envC_2 | CUP52874.1 | ERS852494_02463 | ERS852494_02462 | Putative transmembrane peptidase. | Transcriptional regulator. | 0.834 |
envC_2 | CUP58074.1 | ERS852494_02463 | ERS852494_02598 | Putative transmembrane peptidase. | Uncharacterised protein. | 0.670 |
envC_2 | alaS_1 | ERS852494_02463 | ERS852494_02464 | Putative transmembrane peptidase. | Putative alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.725 |
envC_2 | envC_1 | ERS852494_02463 | ERS852494_00519 | Putative transmembrane peptidase. | Membrane-bound metallopeptidase. | 0.518 |
envC_2 | mrcA | ERS852494_02463 | ERS852494_01667 | Putative transmembrane peptidase. | Membrane carboxypeptidase/penicillin-binding protein. | 0.536 |
mrcA | envC_1 | ERS852494_01667 | ERS852494_00519 | Membrane carboxypeptidase/penicillin-binding protein. | Membrane-bound metallopeptidase. | 0.501 |
mrcA | envC_2 | ERS852494_01667 | ERS852494_02463 | Membrane carboxypeptidase/penicillin-binding protein. | Putative transmembrane peptidase. | 0.536 |