Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP47352.1 | idi | ERS852494_02317 | ERS852494_02485 | Predicted membrane protein. | NTP pyrophosphohydrolase. | 0.465 |
CUP88237.1 | idi | ERS852494_03318 | ERS852494_02485 | Smr domain./Domain of uncharacterised function (DUF2027). | NTP pyrophosphohydrolase. | 0.418 |
CUP88237.1 | queA_2 | ERS852494_03318 | ERS852494_02484 | Smr domain./Domain of uncharacterised function (DUF2027). | Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.418 |
idi | CUP47352.1 | ERS852494_02485 | ERS852494_02317 | NTP pyrophosphohydrolase. | Predicted membrane protein. | 0.465 |
idi | CUP88237.1 | ERS852494_02485 | ERS852494_03318 | NTP pyrophosphohydrolase. | Smr domain./Domain of uncharacterised function (DUF2027). | 0.418 |
idi | ksgA | ERS852494_02485 | ERS852494_02447 | NTP pyrophosphohydrolase. | Putative dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.746 |
idi | queA_2 | ERS852494_02485 | ERS852494_02484 | NTP pyrophosphohydrolase. | Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.749 |
ksgA | idi | ERS852494_02447 | ERS852494_02485 | Putative dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | NTP pyrophosphohydrolase. | 0.746 |
queA_2 | CUP88237.1 | ERS852494_02484 | ERS852494_03318 | Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Smr domain./Domain of uncharacterised function (DUF2027). | 0.418 |
queA_2 | idi | ERS852494_02484 | ERS852494_02485 | Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | NTP pyrophosphohydrolase. | 0.749 |