STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP78812.1Hyaluronoglucosaminidase. (737 aa)    
Predicted Functional Partners:
exo-7
Putative glycosyl hydrolase%2C beta-N-acetylhexosaminidase.
     0.781
CUO48683.1
Uncharacterised protein.
 
     0.697
exo-6
Glycoside hydrolase.
 
     0.611
CUQ07501.1
Glycoside hydrolase.
 
     0.595
nagJ_2
Putative lipoprotein.
  
     0.583
CUP49720.1
Coagulation factor 5/8 type domain protein.
  
   
 0.578
CUP73786.1
Putative lipoprotein.
  
     0.572
CUP47030.1
Coagulation factor 5/8 type domain protein.
  
   
 0.571
CUO57024.1
Putative lipoprotein.
  
   
 0.567
CUP79299.1
Coagulation factor 5/8 type domain protein.
  
   
 0.566
Your Current Organism:
Bacteroides caccae
NCBI taxonomy Id: 47678
Other names: ATCC 43185, B. caccae, CCUG 38735, CIP 104201, DSM 19024, JCM 9498, NCTC 13051, VPI 3452A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.