Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP84307.1 | frrG_2 | ERS852494_03205 | ERS852494_03208 | Pectate lyase L. | Putative outer membrane protein. | 0.600 |
CUP84307.1 | frrH_2 | ERS852494_03205 | ERS852494_03207 | Pectate lyase L. | Putative outer membrane protein. | 0.500 |
CUP84307.1 | lacZ_14 | ERS852494_03205 | ERS852494_03206 | Pectate lyase L. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.718 |
CUP84307.1 | ugl_2 | ERS852494_03205 | ERS852494_00338 | Pectate lyase L. | Unsaturated glucuronyl hydrolase. | 0.407 |
frrG_2 | CUP84307.1 | ERS852494_03208 | ERS852494_03205 | Putative outer membrane protein. | Pectate lyase L. | 0.600 |
frrG_2 | frrH_2 | ERS852494_03208 | ERS852494_03207 | Putative outer membrane protein. | Putative outer membrane protein. | 0.943 |
frrG_2 | lacZ_14 | ERS852494_03208 | ERS852494_03206 | Putative outer membrane protein. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.521 |
frrH_2 | CUP84307.1 | ERS852494_03207 | ERS852494_03205 | Putative outer membrane protein. | Pectate lyase L. | 0.500 |
frrH_2 | frrG_2 | ERS852494_03207 | ERS852494_03208 | Putative outer membrane protein. | Putative outer membrane protein. | 0.943 |
frrH_2 | lacZ_14 | ERS852494_03207 | ERS852494_03206 | Putative outer membrane protein. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.535 |
lacZ_14 | CUP84307.1 | ERS852494_03206 | ERS852494_03205 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | Pectate lyase L. | 0.718 |
lacZ_14 | frrG_2 | ERS852494_03206 | ERS852494_03208 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | Putative outer membrane protein. | 0.521 |
lacZ_14 | frrH_2 | ERS852494_03206 | ERS852494_03207 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | Putative outer membrane protein. | 0.535 |
ugl_2 | CUP84307.1 | ERS852494_00338 | ERS852494_03205 | Unsaturated glucuronyl hydrolase. | Pectate lyase L. | 0.407 |