Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP99010.1 | CUP99037.1 | ERS852494_03646 | ERS852494_03647 | FOG: HEAT repeat. | FOG: HEAT repeat. | 0.809 |
CUP99010.1 | CUP99068.1 | ERS852494_03646 | ERS852494_03648 | FOG: HEAT repeat. | FOG: HEAT repeat. | 0.801 |
CUP99010.1 | CUP99097.1 | ERS852494_03646 | ERS852494_03649 | FOG: HEAT repeat. | Uncharacterised protein. | 0.749 |
CUP99010.1 | CUP99126.1 | ERS852494_03646 | ERS852494_03650 | FOG: HEAT repeat. | Putative lipoprotein. | 0.703 |
CUP99010.1 | CUP99159.1 | ERS852494_03646 | ERS852494_03651 | FOG: HEAT repeat. | Putative TonB dependent outer membrane protein. | 0.639 |
CUP99010.1 | divJ_2 | ERS852494_03646 | ERS852494_02194 | FOG: HEAT repeat. | Two-component system sensor histidine kinase. | 0.519 |
CUP99010.1 | efp | ERS852494_03646 | ERS852494_00621 | FOG: HEAT repeat. | Putative elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.625 |
CUP99037.1 | CUP99010.1 | ERS852494_03647 | ERS852494_03646 | FOG: HEAT repeat. | FOG: HEAT repeat. | 0.809 |
CUP99037.1 | CUP99068.1 | ERS852494_03647 | ERS852494_03648 | FOG: HEAT repeat. | FOG: HEAT repeat. | 0.821 |
CUP99037.1 | CUP99097.1 | ERS852494_03647 | ERS852494_03649 | FOG: HEAT repeat. | Uncharacterised protein. | 0.656 |
CUP99037.1 | CUP99126.1 | ERS852494_03647 | ERS852494_03650 | FOG: HEAT repeat. | Putative lipoprotein. | 0.611 |
CUP99037.1 | CUP99159.1 | ERS852494_03647 | ERS852494_03651 | FOG: HEAT repeat. | Putative TonB dependent outer membrane protein. | 0.576 |
CUP99037.1 | divJ_2 | ERS852494_03647 | ERS852494_02194 | FOG: HEAT repeat. | Two-component system sensor histidine kinase. | 0.519 |
CUP99037.1 | efp | ERS852494_03647 | ERS852494_00621 | FOG: HEAT repeat. | Putative elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.625 |
CUP99068.1 | CUP99010.1 | ERS852494_03648 | ERS852494_03646 | FOG: HEAT repeat. | FOG: HEAT repeat. | 0.801 |
CUP99068.1 | CUP99037.1 | ERS852494_03648 | ERS852494_03647 | FOG: HEAT repeat. | FOG: HEAT repeat. | 0.821 |
CUP99068.1 | CUP99097.1 | ERS852494_03648 | ERS852494_03649 | FOG: HEAT repeat. | Uncharacterised protein. | 0.650 |
CUP99068.1 | CUP99126.1 | ERS852494_03648 | ERS852494_03650 | FOG: HEAT repeat. | Putative lipoprotein. | 0.605 |
CUP99068.1 | CUP99159.1 | ERS852494_03648 | ERS852494_03651 | FOG: HEAT repeat. | Putative TonB dependent outer membrane protein. | 0.576 |
CUP99068.1 | divJ_2 | ERS852494_03648 | ERS852494_02194 | FOG: HEAT repeat. | Two-component system sensor histidine kinase. | 0.519 |
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