Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arcB_1 | divJ_1 | ERS852494_01231 | ERS852494_01855 | Two-component system sensor histidine kinase. | Two-component system histidine kinase. | 0.939 |
arcB_1 | divJ_2 | ERS852494_01231 | ERS852494_02194 | Two-component system sensor histidine kinase. | Two-component system sensor histidine kinase. | 0.996 |
arcB_1 | divK_1 | ERS852494_01231 | ERS852494_00764 | Two-component system sensor histidine kinase. | Two-component system sensor histidine kinase. | 0.974 |
arcB_1 | divK_2 | ERS852494_01231 | ERS852494_04490 | Two-component system sensor histidine kinase. | FOG: CheY-like receiver. | 0.966 |
arcB_1 | evgS_6 | ERS852494_01231 | ERS852494_02008 | Two-component system sensor histidine kinase. | Monosaccharide ABC transporter substrate-binding protein%2C CUT2 family (TC 3.A.1.2.-). | 0.994 |
arcB_1 | evgS_8 | ERS852494_01231 | ERS852494_02403 | Two-component system sensor histidine kinase. | Uncharacterized protein; His Kinase A (phosphoacceptor) domain./Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase./Response regulator receiver domain./Two component regulator propeller./Bacterial regulatory helix-turn-helix proteins%2C AraC family./Y_Y_Y domain. | 0.907 |
arcB_1 | luxQ_1 | ERS852494_01231 | ERS852494_00680 | Two-component system sensor histidine kinase. | Signal transduction histidine kinase. | 0.981 |
arcB_1 | luxQ_2 | ERS852494_01231 | ERS852494_00929 | Two-component system sensor histidine kinase. | Two-component system sensor histidine kinase/response regulator. | 0.615 |
arcB_1 | pleC_2 | ERS852494_01231 | ERS852494_04114 | Two-component system sensor histidine kinase. | Signal transduction histidine kinase. | 0.934 |
arcB_1 | rhaS_2 | ERS852494_01231 | ERS852494_03891 | Two-component system sensor histidine kinase. | Putative two-component system sensor histidine kinase/response regulator fusion protein. | 0.917 |
divJ_1 | arcB_1 | ERS852494_01855 | ERS852494_01231 | Two-component system histidine kinase. | Two-component system sensor histidine kinase. | 0.939 |
divJ_1 | divJ_2 | ERS852494_01855 | ERS852494_02194 | Two-component system histidine kinase. | Two-component system sensor histidine kinase. | 0.990 |
divJ_1 | divK_1 | ERS852494_01855 | ERS852494_00764 | Two-component system histidine kinase. | Two-component system sensor histidine kinase. | 0.963 |
divJ_1 | divK_2 | ERS852494_01855 | ERS852494_04490 | Two-component system histidine kinase. | FOG: CheY-like receiver. | 0.991 |
divJ_1 | evgS_6 | ERS852494_01855 | ERS852494_02008 | Two-component system histidine kinase. | Monosaccharide ABC transporter substrate-binding protein%2C CUT2 family (TC 3.A.1.2.-). | 0.974 |
divJ_1 | evgS_8 | ERS852494_01855 | ERS852494_02403 | Two-component system histidine kinase. | Uncharacterized protein; His Kinase A (phosphoacceptor) domain./Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase./Response regulator receiver domain./Two component regulator propeller./Bacterial regulatory helix-turn-helix proteins%2C AraC family./Y_Y_Y domain. | 0.936 |
divJ_1 | luxQ_1 | ERS852494_01855 | ERS852494_00680 | Two-component system histidine kinase. | Signal transduction histidine kinase. | 0.947 |
divJ_1 | luxQ_2 | ERS852494_01855 | ERS852494_00929 | Two-component system histidine kinase. | Two-component system sensor histidine kinase/response regulator. | 0.943 |
divJ_1 | pleC_2 | ERS852494_01855 | ERS852494_04114 | Two-component system histidine kinase. | Signal transduction histidine kinase. | 0.493 |
divJ_1 | rhaS_2 | ERS852494_01855 | ERS852494_03891 | Two-component system histidine kinase. | Putative two-component system sensor histidine kinase/response regulator fusion protein. | 0.928 |
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