Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO58611.1 | CUQ12289.1 | ERS852494_00254 | ERS852494_04025 | RHS repeat-associated core domain. | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.509 |
CUP02971.1 | CUQ12289.1 | ERS852494_01384 | ERS852494_04025 | Protein of uncharacterised function (DUF2874). | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.479 |
CUP18123.1 | CUP42647.1 | ERS852494_01696 | ERS852494_02241 | DNA-binding transcriptional dual regulator Crp. | Sigma-70 region 4 type 2. | 0.469 |
CUP18123.1 | CUQ04391.1 | ERS852494_01696 | ERS852494_03798 | DNA-binding transcriptional dual regulator Crp. | RNA polymerase Rpb6. | 0.419 |
CUP18123.1 | CUQ12289.1 | ERS852494_01696 | ERS852494_04025 | DNA-binding transcriptional dual regulator Crp. | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.676 |
CUP18123.1 | divJ_2 | ERS852494_01696 | ERS852494_02194 | DNA-binding transcriptional dual regulator Crp. | Two-component system sensor histidine kinase. | 0.522 |
CUP42647.1 | CUP18123.1 | ERS852494_02241 | ERS852494_01696 | Sigma-70 region 4 type 2. | DNA-binding transcriptional dual regulator Crp. | 0.469 |
CUP42647.1 | CUQ04391.1 | ERS852494_02241 | ERS852494_03798 | Sigma-70 region 4 type 2. | RNA polymerase Rpb6. | 0.506 |
CUP42647.1 | CUQ12289.1 | ERS852494_02241 | ERS852494_04025 | Sigma-70 region 4 type 2. | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.548 |
CUP42647.1 | divJ_2 | ERS852494_02241 | ERS852494_02194 | Sigma-70 region 4 type 2. | Two-component system sensor histidine kinase. | 0.837 |
CUQ04391.1 | CUP18123.1 | ERS852494_03798 | ERS852494_01696 | RNA polymerase Rpb6. | DNA-binding transcriptional dual regulator Crp. | 0.419 |
CUQ04391.1 | CUP42647.1 | ERS852494_03798 | ERS852494_02241 | RNA polymerase Rpb6. | Sigma-70 region 4 type 2. | 0.506 |
CUQ04391.1 | CUQ12289.1 | ERS852494_03798 | ERS852494_04025 | RNA polymerase Rpb6. | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.504 |
CUQ12289.1 | CUO58611.1 | ERS852494_04025 | ERS852494_00254 | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | RHS repeat-associated core domain. | 0.509 |
CUQ12289.1 | CUP02971.1 | ERS852494_04025 | ERS852494_01384 | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Protein of uncharacterised function (DUF2874). | 0.479 |
CUQ12289.1 | CUP18123.1 | ERS852494_04025 | ERS852494_01696 | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | DNA-binding transcriptional dual regulator Crp. | 0.676 |
CUQ12289.1 | CUP42647.1 | ERS852494_04025 | ERS852494_02241 | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Sigma-70 region 4 type 2. | 0.548 |
CUQ12289.1 | CUQ04391.1 | ERS852494_04025 | ERS852494_03798 | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | RNA polymerase Rpb6. | 0.504 |
CUQ12289.1 | CUQ12315.1 | ERS852494_04025 | ERS852494_04026 | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Uncharacterised protein. | 0.590 |
CUQ12289.1 | CUQ12341.1 | ERS852494_04025 | ERS852494_04027 | Crp/Fnr family transcriptional regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Phosphoglycolate phosphatase. | 0.488 |
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