STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ21243.1Uncharacterised protein. (273 aa)    
Predicted Functional Partners:
CUQ21223.1
Protein of uncharacterised function (DUF2493).
       0.773
CUQ21155.1
Uncharacterised protein.
       0.631
CUQ21173.1
Cell division protein FtsZ.
       0.631
CUQ21195.1
Uncharacterised protein.
       0.631
CUQ21261.1
Transcriptional regulator.
       0.468
polC_2
Exonuclease RNase T and DNA polymerase III.
       0.468
CUQ21306.1
Uncharacterised protein.
       0.454
CUQ21323.1
Uncharacterized conserved protein.
       0.436
CUQ21348.1
Uncharacterized conserved protein.
       0.436
CUQ21131.1
Uncharacterised protein.
       0.425
Your Current Organism:
Bacteroides caccae
NCBI taxonomy Id: 47678
Other names: ATCC 43185, B. caccae, CCUG 38735, CIP 104201, DSM 19024, JCM 9498, NCTC 13051, VPI 3452A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.