Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP14527.1 | CUP81930.1 | ERS852494_01608 | ERS852494_03174 | Phage Mu protein F like protein. | Uncharacterised protein. | 0.569 |
CUP14527.1 | CUQ22587.1 | ERS852494_01608 | ERS852494_04366 | Phage Mu protein F like protein. | Transposase. | 0.679 |
CUP14527.1 | CUQ22660.1 | ERS852494_01608 | ERS852494_04369 | Phage Mu protein F like protein. | Putative excisionase. | 0.640 |
CUP14527.1 | CUQ22685.1 | ERS852494_01608 | ERS852494_04370 | Phage Mu protein F like protein. | Uncharacterised protein. | 0.601 |
CUP14527.1 | CUQ22705.1 | ERS852494_01608 | ERS852494_04371 | Phage Mu protein F like protein. | Uncharacterised protein. | 0.485 |
CUP14527.1 | per1_2 | ERS852494_01608 | ERS852494_04373 | Phage Mu protein F like protein. | Beta-lactamase. | 0.561 |
CUP14527.1 | xerD_13 | ERS852494_01608 | ERS852494_04367 | Phage Mu protein F like protein. | Integrase; Belongs to the 'phage' integrase family. | 0.443 |
CUP65720.1 | CUQ22587.1 | ERS852494_02760 | ERS852494_04366 | Conjugate transposon protein. | Transposase. | 0.574 |
CUP65720.1 | CUQ22660.1 | ERS852494_02760 | ERS852494_04369 | Conjugate transposon protein. | Putative excisionase. | 0.548 |
CUP65720.1 | per1_2 | ERS852494_02760 | ERS852494_04373 | Conjugate transposon protein. | Beta-lactamase. | 0.402 |
CUP81930.1 | CUP14527.1 | ERS852494_03174 | ERS852494_01608 | Uncharacterised protein. | Phage Mu protein F like protein. | 0.569 |
CUP81930.1 | CUQ22587.1 | ERS852494_03174 | ERS852494_04366 | Uncharacterised protein. | Transposase. | 0.698 |
CUP81930.1 | CUQ22660.1 | ERS852494_03174 | ERS852494_04369 | Uncharacterised protein. | Putative excisionase. | 0.707 |
CUP81930.1 | CUQ22685.1 | ERS852494_03174 | ERS852494_04370 | Uncharacterised protein. | Uncharacterised protein. | 0.638 |
CUP81930.1 | xerD_13 | ERS852494_03174 | ERS852494_04367 | Uncharacterised protein. | Integrase; Belongs to the 'phage' integrase family. | 0.477 |
CUQ22587.1 | CUP14527.1 | ERS852494_04366 | ERS852494_01608 | Transposase. | Phage Mu protein F like protein. | 0.679 |
CUQ22587.1 | CUP65720.1 | ERS852494_04366 | ERS852494_02760 | Transposase. | Conjugate transposon protein. | 0.574 |
CUQ22587.1 | CUP81930.1 | ERS852494_04366 | ERS852494_03174 | Transposase. | Uncharacterised protein. | 0.698 |
CUQ22587.1 | CUQ22660.1 | ERS852494_04366 | ERS852494_04369 | Transposase. | Putative excisionase. | 0.818 |
CUQ22587.1 | CUQ22685.1 | ERS852494_04366 | ERS852494_04370 | Transposase. | Uncharacterised protein. | 0.816 |
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