STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ25426.1Glycosyltransferase. (553 aa)    
Predicted Functional Partners:
malP_2
Alpha-glucan phosphorylase.
 
 0.986
malP_1
Alpha-glucan phosphorylase.
 
 0.946
glgB
1%2C4-alpha-glucan branching enzyme.
 
 0.771
CUP74976.1
ATP synthase F1 subcomplex epsilon subunit.
 
  
 0.711
CUP74903.1
4-alpha-glucanotransferase.
 
 
 0.683
mshA_5
Glycosyl transferase group 1.
  
   
 0.666
CUQ25581.1
Protein of uncharacterised function (DUF2764).
 
   
 0.628
CUQ25471.1
Archaeal/vacuolar-type H+-ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
     
 0.626
CUQ25497.1
Putative V(vacuolar)-type ATP synthase subunit D.
       0.616
ntpB
H+transporting two-sector ATPase alpha/beta subunit central region.
  
    0.597
Your Current Organism:
Bacteroides caccae
NCBI taxonomy Id: 47678
Other names: ATCC 43185, B. caccae, CCUG 38735, CIP 104201, DSM 19024, JCM 9498, NCTC 13051, VPI 3452A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.