Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OBX63088.1 | cph2 | A9309_06160 | A9309_05535 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.950 |
| OBX63088.1 | kamA | A9309_06160 | A9309_01095 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.843 |
| bioB | kamA | A9309_09020 | A9309_01095 | Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.517 |
| cph2 | OBX63088.1 | A9309_05535 | A9309_06160 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.950 |
| cph2 | efp | A9309_05535 | A9309_01100 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.493 |
| cph2 | kamA | A9309_05535 | A9309_01095 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.544 |
| dapE | kamA | A9309_01335 | A9309_01095 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.502 |
| efp | cph2 | A9309_01100 | A9309_05535 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.493 |
| efp | kamA | A9309_01100 | A9309_01095 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.830 |
| efp | yjeA | A9309_01100 | A9309_10735 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| kamA | OBX63088.1 | A9309_01095 | A9309_06160 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.843 |
| kamA | bioB | A9309_01095 | A9309_09020 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.517 |
| kamA | cph2 | A9309_01095 | A9309_05535 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.544 |
| kamA | dapE | A9309_01095 | A9309_01335 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.502 |
| kamA | efp | A9309_01095 | A9309_01100 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.830 |
| kamA | yjeA | A9309_01095 | A9309_10735 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.811 |
| yjeA | efp | A9309_10735 | A9309_01100 | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.928 |
| yjeA | kamA | A9309_10735 | A9309_01095 | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.811 |