STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobBHypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (91 aa)    
Predicted Functional Partners:
nadR_1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.924
gdhA
Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.717
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.676
OBX64739.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.671
OBX58999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.623
vdh
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
    
  0.597
OBX61889.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.549
OBX63117.1
Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.507
OBX67410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.453
nadR_2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.444
Your Current Organism:
Moraxella lacunata
NCBI taxonomy Id: 477
Other names: ATCC 17967, Bacillus lacunatus, CCUG 4441, CIP A182, DSM 18052, Diplobacille de la conjonctivite subaigue, Diplobacillus moraxenfeld, JCM 20914, LMG 5301, LMG:5301, M. lacunata, NBRC 102154, NCTC 11011, strain Morax 260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.