Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYC_01480 | KYC_01485 | UvrD/Rep helicase family protein 2; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | Hypothetical protein; COG2887 RecB family exonuclease. | 0.999 |
KYC_01480 | KYC_01490 | UvrD/Rep helicase family protein 2; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | Hypothetical protein. | 0.521 |
KYC_01480 | KYC_01495 | UvrD/Rep helicase family protein 2; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | Hypothetical protein. | 0.511 |
KYC_01485 | KYC_01480 | Hypothetical protein; COG2887 RecB family exonuclease. | UvrD/Rep helicase family protein 2; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | 0.999 |
KYC_01485 | KYC_01490 | Hypothetical protein; COG2887 RecB family exonuclease. | Hypothetical protein. | 0.561 |
KYC_01485 | KYC_01495 | Hypothetical protein; COG2887 RecB family exonuclease. | Hypothetical protein. | 0.550 |
KYC_01490 | KYC_01480 | Hypothetical protein. | UvrD/Rep helicase family protein 2; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | 0.521 |
KYC_01490 | KYC_01485 | Hypothetical protein. | Hypothetical protein; COG2887 RecB family exonuclease. | 0.561 |
KYC_01490 | KYC_01495 | Hypothetical protein. | Hypothetical protein. | 0.757 |
KYC_01490 | KYC_01500 | Hypothetical protein. | Hypothetical protein. | 0.508 |
KYC_01490 | KYC_01505 | Hypothetical protein. | COG0477 Permeases of the major facilitator superfamily. | 0.481 |
KYC_01495 | KYC_01480 | Hypothetical protein. | UvrD/Rep helicase family protein 2; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | 0.511 |
KYC_01495 | KYC_01485 | Hypothetical protein. | Hypothetical protein; COG2887 RecB family exonuclease. | 0.550 |
KYC_01495 | KYC_01490 | Hypothetical protein. | Hypothetical protein. | 0.757 |
KYC_01495 | KYC_01500 | Hypothetical protein. | Hypothetical protein. | 0.518 |
KYC_01495 | KYC_01505 | Hypothetical protein. | COG0477 Permeases of the major facilitator superfamily. | 0.490 |
KYC_01500 | KYC_01490 | Hypothetical protein. | Hypothetical protein. | 0.508 |
KYC_01500 | KYC_01495 | Hypothetical protein. | Hypothetical protein. | 0.518 |
KYC_01500 | KYC_01505 | Hypothetical protein. | COG0477 Permeases of the major facilitator superfamily. | 0.727 |
KYC_01505 | KYC_01490 | COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein. | 0.481 |
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