STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_02409COG1073 Hydrolases of the alpha/beta superfamily. (437 aa)    
Predicted Functional Partners:
KYC_02404
Extracellular solute-binding protein, family 5 middle family protein 20; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
     0.908
KYC_02414
Carboxymuconolactone decarboxylase family protein 4; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
     0.864
KYC_02379
COG2072 Predicted flavoprotein involved in K+ transport.
 
     0.740
KYC_13022
benzoyl-CoA oxygenase/reductase BoxA; COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB.
  
    0.738
KYC_16057
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
    0.689
fbp
COG0158 Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family.
    
  0.688
KYC_23768
COG0155 Sulfite reductase, beta subunit (hemoprotein).
   
    0.682
KYC_07665
Flavodoxin family protein; COG0369 Sulfite reductase, alpha subunit (flavoprotein).
   
    0.681
KYC_02374
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.641
KYC_02384
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
     0.633
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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