STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_03499Extracellular solute-binding protein, family 5 middle family protein 5; COG0747 ABC-type dipeptide transport system, periplasmic component. (519 aa)    
Predicted Functional Partners:
KYC_03489
Binding-protein-dependent transporter inner membrane component family protein 10; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.929
KYC_03494
Binding-protein-dependent transporter inner membrane component family protein 11; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.857
KYC_22626
Binding-protein-dependent transporter inner membrane component family protein 64; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.773
KYC_09360
Binding-protein-dependent transporter inner membrane component family protein 14; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.753
KYC_25668
ABC transporter permease; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.753
KYC_04652
Binding-protein-dependent transporter inner membrane component family protein 18; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.750
KYC_03747
Glutathione transporter permease GsiD 2; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.747
KYC_10903
Glutathione ABC transporter permease GsiD; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.732
KYC_03484
Oligopeptide transport ATP-binding protein APPD 1; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
  0.686
KYC_03479
Oligopeptide/dipeptide abc transporter ATP-binding protein, c-terminal domain-containing protein 2; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
  0.683
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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