STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_04697COG3395 Uncharacterized protein conserved in bacteria. (447 aa)    
Predicted Functional Partners:
KYC_04702
COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit; Belongs to the RuBisCO large chain family.
 
   
 0.956
KYC_04707
Glyoxalase; COG0346 Lactoylglutathione lyase and related lyases.
 
     0.909
KYC_04722
COG1609 Transcriptional regulators.
 
     0.836
KYC_04712
Tripartite ATP-independent periplasmic transporter subunit DctQ family protein 9; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
       0.586
KYC_00340
Extracellular solute-binding family protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
  
     0.572
KYC_27172
COG3395 Uncharacterized protein conserved in bacteria.
  
     0.551
KYC_04717
TRAP transporter solute receptor subunit DctP family protein 6; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
       0.539
KYC_23643
COG3622 Hydroxypyruvate isomerase; Belongs to the hyi family.
 
  
 0.520
KYC_25628
2-dehydro-3-deoxygalactonokinase; COG3734 2-keto-3-deoxy-galactonokinase.
  
     0.440
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.