STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_05966COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (499 aa)    
Predicted Functional Partners:
KYC_05971
Allantoate amidohydrolase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
  
 
  0.793
KYC_25072
COG0439 Biotin carboxylase.
   
 
 0.772
putA
Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.765
KYC_07191
Glutamate synthase [NADPH] large chain precursor; COG0067 Glutamate synthase domain 1.
  
 
 0.762
KYC_27553
Cytochrome P450:oxidoreductase FAD/NAD(P)-binding protein; COG2124 Cytochrome P450.
  
 
 0.683
KYC_16152
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
   
 0.671
KYC_05711
Putative phenylacetate-CoA ligase; COG1541 Coenzyme F390 synthetase.
   
 0.660
KYC_10798
COG0372 Citrate synthase; Belongs to the citrate synthase family.
   
  0.637
KYC_11018
COG1012 NAD-dependent aldehyde dehydrogenases.
  
  
 
0.624
KYC_00005
COG1454 Alcohol dehydrogenase, class IV.
 
 0.617
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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