STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_06285COG3523 Uncharacterized protein conserved in bacteria. (1243 aa)    
Predicted Functional Partners:
KYC_06290
Type VI secretion-associated protein, family; COG3913 Uncharacterized protein conserved in bacteria.
 
  
 0.958
KYC_06295
OmpA family protein 4; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
  
 0.942
KYC_06275
D-alanyl-D-alanine carboxypeptidase.
 
   
 0.897
KYC_06265
Rhs element Vgr family protein 3; COG3501 Uncharacterized protein conserved in bacteria.
 
  
 0.876
KYC_27628
COG3517 Uncharacterized protein conserved in bacteria.
 
 
 0.875
KYC_27608
COG3522 Uncharacterized protein conserved in bacteria.
 
 
 0.856
KYC_27613
COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.856
KYC_27623
COG3516 Uncharacterized protein conserved in bacteria.
 
 
 0.856
KYC_27648
COG3520 Uncharacterized protein conserved in bacteria.
 
 
 0.840
KYC_27603
Type VI secretion system protein ImpK; COG3455 Uncharacterized protein conserved in bacteria.
 
 
 0.834
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.