STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_07081Hypothetical protein; Belongs to the D-glutamate cyclase family. (268 aa)    
Predicted Functional Partners:
KYC_25072
COG0439 Biotin carboxylase.
  
    0.971
KYC_05204
COG2049 Allophanate hydrolase subunit 1.
 
    0.903
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
    0.846
KYC_05209
Biotin-dependent carboxylase uncharacterized domain-containing protein 1; COG1984 Allophanate hydrolase subunit 2.
 
    0.837
KYC_07071
Hypothetical protein.
 
     0.780
KYC_07061
Tripartite ATP-independent periplasmic transporter subunit DctQ family protein 6; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
     0.731
KYC_07076
Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family.
       0.672
KYC_04597
Hypothetical protein.
 
     0.647
KYC_07056
Extracellular solute-binding protein, family 7 family protein 2; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.637
KYC_26242
Natural resistance-associated macrophage family protein; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family.
  
    0.526
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.