STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_08090Transmembrane protein; COG1835 Predicted acyltransferases. (888 aa)    
Predicted Functional Partners:
KYC_08085
Hypothetical protein.
 
     0.835
KYC_08070
NAD-dependent epimerase/dehydratase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
 
     0.783
KYC_08075
Hypothetical protein; COG1232 Protoporphyrinogen oxidase.
 
     0.780
KYC_08055
Hypothetical protein.
 
     0.761
KYC_08045
FAD linked oxidase; COG0277 FAD/FMN-containing dehydrogenases; FAD linked oxidase, N-terminal.
 
     0.516
KYC_08040
Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; Belongs to the UbiA prenyltransferase family.
 
     0.484
KYC_08050
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.473
KYC_08065
Hypothetical protein.
 
    
0.470
KYC_19344
YadA domain-containing protein; COG5295 Autotransporter adhesin.
  
     0.459
KYC_27843
YadA domain-containing protein; COG5295 Autotransporter adhesin.
  
     0.438
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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